SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001136264
Gene Symbol: DAZAP2

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.51242605T>C COSM4042675 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548az-5p caggCACTTTTcaaa CAAAAGUG m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-548t-5p caggCACTTTTcaaa CAAAAGUG m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-93-5p cagGCACTTTtcaaa CAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-6730-5p caggcACCTTTCaaa AGAAAGGU m7b Created HPHES_1786_G2384.1_51636379
hsa-miR-5681a caggcaCCTTTCaaa AGAAAGGG m6b Created HPHES_1786_G2384.1_51636379
hsa-miR-550a-5p CAGGCACTtttcaaa AGUGCCUG m8a Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-550a-3-5p CAGGCACTtttcaaa AGUGCCUG m8a Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-526b-3p cagGCACTTTtcaaa GAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-33b-3p cAGGCACTtttcaaa CAGUGCCU m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-20b-5p cagGCACTTTtcaaa CAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-20a-5p cagGCACTTTtcaaa UAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-18b-5p cagGCACCTTtcaaa UAAGGUGC m7b Created HPHES_1786_G2384.1_51636379
hsa-miR-18a-5p cagGCACCTTtcaaa UAAGGUGC m7b Created HPHES_1786_G2384.1_51636379
hsa-miR-17-5p cagGCACTTTtcaaa CAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-1271-3p CAGGCACTtttcaaa AGUGCCUG m8a Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-106b-5p cagGCACTTTtcaaa UAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-519e-3p cAGGCACTTttcaaa AAGUGCCU m8a (m8a->m7a) HPHES_1786_G2384.1_51636379
hsa-miR-519d-3p cagGCACTTTtcaaa CAAAGUGC m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-106a-5p cagGCACTTTTcaaa AAAAGUGC m8a Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-515-3p cAGGCACTtttcaaa GAGUGCCU m7b Disrupted HPHES_1786_G2384.1_51636379
hsa-miR-488-3p caggcaCCTTTCAAa UUGAAAGG m8a Created HPHES_1786_G2384.1_51636379
hsa-miR-4735-3p cagGCACCTTTcaaa AAAGGUGC m8a Created HPHES_1786_G2384.1_51636379

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser