SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001136196
Gene Symbol: TNPO2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.12699354G>C COSN8604980 J9_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-605-3p tgGCCTTCagccaca AGAAGGCA m6b Created HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-6126 tgGCCTTCAgccaca GUGAAGGC m7b (m6b->m7b) HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-647 tggccttCAGCCACa GUGGCUGC m7a Created HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-7158-5p tggccTTGAGCCaca GGCUCAAU m7a Disrupted HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-8057 tggccttGAGCCACa GUGGCUCU m7a Disrupted HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-3922-5p tGGCCTTGAgccaca UCAAGGCC m8a (m8a->m7a) HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-4284 tggcctTGAGCCaca GGGCUCAC m6b Disrupted HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-4493 tGGCCTTCagccaca AGAAGGCC m7b Created HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773
hsa-miR-4753-5p TGGCCTTGagccaca CAAGGCCA m8a Disrupted HHHNH_3956_TNPO2|NM_001136195|exon_utr3|-6.36126395710541|0.334313232961773

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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