SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135703
Gene Symbol: LRP12

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.104497398A>C COSM3884538 TCGA-HU-8604-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4726-3p ggaggtACCTGGGgg ACCCAGGU m7b Created HPKMB_7772_G8924.1_105509612
hsa-miR-935 ggagGTAACTGGggg CCAGUUAC m8a Disrupted HPKMB_7772_G8924.1_105509612

Mutation Mutation ID Sample Name Cancer Type
chr8:g.104497383C>A COSM1132883 TCGA-EJ-5511-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-1-3p tgttATACTGagcag CCAGUAUU m6b Disrupted HPKMB_7772_G8924.1_105509612
hsa-miR-4528 tgtTATAATGAgcag UCAUUAUA m8a Created HPKMB_7772_G8924.1_105509612
hsa-miR-4797-3p tgttaTACTGAGcag UCUCAGUA m7b Disrupted HPKMB_7772_G8924.1_105509612
hsa-miR-6847-3p tgttataATGAGCag GGCUCAUG m6b Created HPKMB_7772_G8924.1_105509612

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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