SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134659
Gene Symbol: PRR23A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.139006029C>T COSM581881 TCGA-05-4397-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4633-3p ggAGCTCCagcacca AGGAGCUA m6b Disrupted HPSD3_6833_G9166.1_138724872
hsa-miR-6500-5p ggAGCTCCagcacca AGGAGCUA m6b Disrupted HPSD3_6833_G9166.1_138724872
hsa-miR-6874-5p ggAGCTCCAgcacca AUGGAGCU m7b (m7b->m6b) HPSD3_6833_G9166.1_138724872
hsa-miR-3135b ggagCTCCAGCacca GGCUGGAG m7b Disrupted HPSD3_6833_G9166.1_138724872
hsa-miR-3670 gGAGCTCTagcacca AGAGCUCA m7a Created HPSD3_6833_G9166.1_138724872

Mutation Mutation ID Sample Name Cancer Type
chr3:g.139006019G>A COSM4718101 T3202 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-5p gacgttGACGGGagc ACCCGUCC m6b Created HPSD3_6833_G9166.1_138724872
hsa-miR-4258 gacgtTGGCGGGagc CCCCGCCA m7b Disrupted HPSD3_6833_G9166.1_138724872
hsa-miR-7108-3p gacgttGGCGGGagc ACCCGCCC m6b Disrupted HPSD3_6833_G9166.1_138724872
Mutation Mutation ID Sample Name Cancer Type
chr3:g.139006012G>A COSM1222217 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.139006011C>T COSM3588038 TCGA-FS-A4F9-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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