SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134479
Gene Symbol: LRRC8D

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.89933605T>C COSM219316 PD4006a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5089-3p tggtcAGTAGCAact AUGCUACU m7b Disrupted HPKTB_269_G328.1_90399158
hsa-miR-628-5p tgGTCAGCAgcaact AUGCUGAC m7b (m6b->m7b) HPKTB_269_G328.1_90399158
hsa-miR-888-3p tgGTCAGTagcaact GACUGACA m6b Disrupted HPKTB_269_G328.1_90399158
hsa-miR-93-3p tggTCAGCAGcaact ACUGCUGA m7b Created HPKTB_269_G328.1_90399158

Mutation Mutation ID Sample Name Cancer Type
chr1:g.89933594C>A COSM4788684 CHC1182T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-3p tattATTCTCAtggt UUGAGAAU m7b Disrupted HPKTB_269_G328.1_90399158

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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