SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001134479 |
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Gene Symbol: | LRRC8D |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.89935209C>T | COSM4843552 | TCGA-EA-A3QE-01 | [cervix][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1303 | tattTCTCTAAcaac | UUUAGAGA | m7b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-186-5p | tatTTCTTTaacaac | CAAAGAAU | m6b | Created | HPHES_203_G270.1_90400780 |
hsa-miR-2053 | tatttctTTAACAac | GUGUUAAU | m6b | Created | HPHES_203_G270.1_90400780 |
hsa-miR-3123 | tatTTCTCTaacaac | CAGAGAAU | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-3133 | tatTTCTTTAacaac | UAAAGAAC | m7a | Created | HPHES_203_G270.1_90400780 |
hsa-miR-539-5p | tATTTCTCtaacaac | GGAGAAAU | m7b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-3925-5p | tatTTCTCTaacaac | AAGAGAAC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89935197C>A | COSM5000470 | PDA_045 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-519d-3p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-508-5p | tTGGAGTAactttat | UACUCCAG | m7a | Created | HPHES_203_G270.1_90400780 |
hsa-miR-3609 | ttggagTCACTTTat | CAAAGUGA | m7b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-526b-3p | ttggagtCACTTTat | GAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-548ah-5p | ttggagTCACTTTat | AAAAGUGA | m7b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-548at-5p | ttggagTAACTTTat | AAAAGUUA | m7b | Created | HPHES_203_G270.1_90400780 |
hsa-miR-561-3p | ttggagtAACTTTat | CAAAGUUU | m6b | Created | HPHES_203_G270.1_90400780 |
hsa-miR-93-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-20b-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-106a-5p | ttggagtCACTTTat | AAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
hsa-miR-17-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HPHES_203_G270.1_90400780 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89935138A>G | COSM1748651 | B98-Tumor | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5590-5p | taaaatTATGGCAta | UUGCCAUA | m7b | Disrupted | HPHES_202_G269.1_90400700 |
hsa-miR-3064-3p | taaaatTGTGGCAta | UUGCCACA | m7b | Created | HPHES_202_G269.1_90400700 |
hsa-miR-4775 | tAAAATTAtggcata | UUAAUUUU | m7b | Disrupted | HPHES_202_G269.1_90400700 |
hsa-miR-590-3p | TAAAATTAtggcata | UAAUUUUA | m8a | Disrupted | HPHES_202_G269.1_90400700 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89935136T>G | COSM1667699 | HCC2998 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-590-3p | ttTAAAATTAtggca | UAAUUUUA | m8a | Disrupted | HPHES_202_G269.1_90400700 |
hsa-miR-1-5p | tttaaAAGTATGgca | ACAUACUU | m7b | Created | HPHES_202_G269.1_90400700 |
hsa-miR-4775 | tttAAAATTAtggca | UUAAUUUU | m7b | Disrupted | HPHES_202_G269.1_90400700 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89933594C>A | COSM4788684 | CHC1182T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-580-3p | tattATTCTCAtggt | UUGAGAAU | m7b | Disrupted | HPHES_201_G268.1_90399129 |