SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001134479 |
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Gene Symbol: | LRRC8D |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.89935209C>T | COSM4843552 | TCGA-EA-A3QE-01 | [cervix][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1303 | tattTCTCTAAcaac | UUUAGAGA | m7b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-186-5p | tatTTCTTTaacaac | CAAAGAAU | m6b | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-2053 | tatttctTTAACAac | GUGUUAAU | m6b | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-3123 | tatTTCTCTaacaac | CAGAGAAU | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-3133 | tatTTCTTTAacaac | UAAAGAAC | m7a | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-3925-5p | tatTTCTCTaacaac | AAGAGAAC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-539-5p | tATTTCTCtaacaac | GGAGAAAU | m7b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89935197C>A | COSM5000470 | PDA_045 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-106a-5p | ttggagtCACTTTat | AAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-17-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-20b-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-3609 | ttggagTCACTTTat | CAAAGUGA | m7b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-508-5p | tTGGAGTAactttat | UACUCCAG | m7a | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-519d-3p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-526b-3p | ttggagtCACTTTat | GAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-548ah-5p | ttggagTCACTTTat | AAAAGUGA | m7b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-548at-5p | ttggagTAACTTTat | AAAAGUUA | m7b | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-561-3p | ttggagtAACTTTat | CAAAGUUU | m6b | Created | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-93-5p | ttggagtCACTTTat | CAAAGUGC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89935193G>T | COSM1728729 | 038T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3145-5p | aaacTTGGAGTcact | AACUCCAA | m7b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-3691-3p | aaACTTGGagtcact | ACCAAGUC | m6b | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
hsa-miR-5695 | aaaCTTGGAGTcact | ACUCCAAG | m8a | Disrupted | HHKTB_227_NM_001134479|2537|2576|230.397560106414|0.574336971543562 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89933605T>C | COSM219316 | PD4006a | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5089-3p | tggtcAGTAGCAact | AUGCUACU | m7b | Disrupted | HHKTB_1286_NM_001134479|925|964|55.5274695220494|0.574336971543562 |
hsa-miR-628-5p | tgGTCAGCAgcaact | AUGCUGAC | m7b | (m6b->m7b) | HHKTB_1286_NM_001134479|925|964|55.5274695220494|0.574336971543562 |
hsa-miR-888-3p | tgGTCAGTagcaact | GACUGACA | m6b | Disrupted | HHKTB_1286_NM_001134479|925|964|55.5274695220494|0.574336971543562 |
hsa-miR-93-3p | tggTCAGCAGcaact | ACUGCUGA | m7b | Created | HHKTB_1286_NM_001134479|925|964|55.5274695220494|0.574336971543562 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.89933594C>A | COSM4788684 | CHC1182T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-580-3p | tattATTCTCAtggt | UUGAGAAU | m7b | Disrupted | HHKTB_1286_NM_001134479|925|964|55.5274695220494|0.574336971543562 |