SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134420
Gene Symbol: CDC7
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.91520252G>T COSM4010574 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6824-3p atCCAGAGAaactat UCUCUGGU m7a (m7a->m6a) HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-6809-3p atccAGAGAAactat CUUCUCUU m6b Disrupted HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-6764-3p atCCAGAGAaactat UCUCUGGU m7a (m7a->m6a) HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-518c-5p aTCCAGAGAaactat UCUCUGGA m8a (m8a->m7a) HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-1298-3p atCCAGATaaactat CAUCUGGG m6b Created HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-4768-5p atccAGAGAAactat AUUCUCUC m6b Disrupted HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-330-5p atCCAGAGAaactat UCUCUGGG m7a (m7a->m6a) HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-3191-5p atCCAGAGAaactat CUCUCUGG m7b (m7b->m6b) HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134
hsa-miR-3126-3p atCCAGATaaactat CAUCUGGC m6b Created HHHNH_670_CDC7|NM_001134419|exon_CDS|-6.80373744711427|0.604054745487134

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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