SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
	Home	Search	Help	Download

Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001134367
Gene Symbol:	SLC6A6

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr3:g.14485064T>C		COSN1919030	RK023_C01	[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6871-5p	tagatTCCCATagga	CAUGGGAG	m6b	Created	HHHNH_3447_SLC6A6|NM_001134367|exon_utr3|-5.11858938290339|0.112948238848867
hsa-miR-580-3p	tagATTCTCAtagga	UUGAGAAU	m7b	Disrupted	HHHNH_3447_SLC6A6|NM_001134367|exon_utr3|-5.11858938290339|0.112948238848867
hsa-miR-4712-3p	tagatTCTCATagga	AAUGAGAG	m6b	Disrupted	HHHNH_3447_SLC6A6|NM_001134367|exon_utr3|-5.11858938290339|0.112948238848867

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser