SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001130447
Gene Symbol: HAUS2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.42566680G>A COSM961755 TCGA-A5-A0VP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-491-3p aagtgGCATAAacaa CUUAUGCA m6b Created HPTA1_3967_G5549.1_42858874
hsa-miR-4633-5p aagtGGCATAaacaa AUAUGCCU m6b Created HPTA1_3967_G5549.1_42858874
hsa-miR-122-3p aagTGGCGTaaacaa AACGCCAU m6b Disrupted HPTA1_3967_G5549.1_42858874

Mutation Mutation ID Sample Name Cancer Type
chr15:g.42563839T>C COSM1372943 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 atttAGCTGCAaatc UGCAGCUC m7a Disrupted HPTA1_3966_G5548.1_42856033
hsa-miR-5047 atttAGCTGCAAatc UUGCAGCU m8a Disrupted HPTA1_3966_G5548.1_42856033
hsa-miR-7156-3p atttaGCTGCAaatc CUGCAGCC m6b Disrupted HPTA1_3966_G5548.1_42856033
hsa-miR-1301-3p atttAGCTGCAAatc UUGCAGCU m8a Disrupted HPTA1_3966_G5548.1_42856033

Mutation Mutation ID Sample Name Cancer Type
chr15:g.42561379A>G COSM187907 TCGA-A6-2672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-31-5p aaaaCTTGCCTattg AGGCAAGA m7a Created HPTA1_3965_G5547.1_42853567

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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