| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001127215 |
|---|---|
| Gene Symbol: | GFI1 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476167C>T | COSM3493363 | TCGA-D3-A3MR-06 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3064-5p | aggcattCAGCCAGa | UCUGGCUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4794 | aggcattTAGCCAGa | UCUGGCUA | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6504-5p | aggcattCAGCCAGa | UCUGGCUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-664a-5p | aggcattTAGCCAGa | ACUGGCUA | m7b | Created | HPSD3_770_G1032.1_92941698 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476154A>C | COSM4420039 | SNU_18_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1233-5p | gagCTCCCACctcat | AGUGGGAG | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-377-5p | gagctcCAACCTCat | AGAGGUUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4300 | gAGCTCCCAcctcat | UGGGAGCU | m8a | (m7a->m8a) | HPSD3_770_G1032.1_92941698 |
| hsa-miR-5591-5p | gAGCTCCCAcctcat | UGGGAGCU | m8a | (m7a->m8a) | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6086 | gagctcCAACCTCat | GGAGGUUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6090 | gaGCTCCCacctcat | GGGGAGCG | m6b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6134 | gagctcCCACCTCAt | UGAGGUGG | m8a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-655-5p | gagctccAACCTCat | AGAGGUUA | m6b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6726-5p | gAGCTCCCacctcat | CGGGAGCU | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6778-5p | gagCTCCCACctcat | AGUGGGAG | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6874-5p | gAGCTCCAacctcat | AUGGAGCU | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476151C>T | COSM4459928 | CSCC-35-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-377-5p | ctcCAACCTCatcac | AGAGGUUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-382-5p | ctcCAACTTCatcac | GAAGUUGU | m7a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-495-5p | ctcCAACTTCatcac | GAAGUUGC | m7a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6086 | ctcCAACCTCatcac | GGAGGUUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-655-5p | ctccAACCTCatcac | AGAGGUUA | m6b | Disrupted | HPSD3_770_G1032.1_92941698 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476149C>T | COSM1296794 | TCGA-DK-A1AC-01 | [urinary_tract][bladder][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3161 | ccaacCTTATCAccc | CUGAUAAG | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-377-5p | cCAACCTCatcaccc | AGAGGUUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476146C>T | COSM536691 | TCGA-05-4398-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1225-5p | acctcatTACCCACa | GUGGGUAC | m7a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-1229-5p | acctcatTACCCACa | GUGGGUAG | m7a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-1262 | acctcaTCACCCAca | AUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4701-3p | acctcaTCACCCAca | AUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-555 | acctcaTTACCCaca | AGGGUAAG | m6b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6736-5p | acctcaTCACCCAca | CUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6741-5p | acctcatCACCCACa | GUGGGUGC | m7a | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6748-5p | acctcatCACCCACa | UGUGGGUG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.92476144C>G | COSM4775138 | 2321365 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_T_cell_leukaemia] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1262 | ctcaTCACCCAcagc | AUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-134-3p | ctcatcaCCCACAGc | CCUGUGGG | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4474-3p | ctcatcAGCCACAgc | UUGUGGCU | m7b | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4502 | cTCATCAGCcacagc | GCUGAUGA | m8a | (m7a->m8a) | HPSD3_770_G1032.1_92941698 |
| hsa-miR-4701-3p | ctcaTCACCCAcagc | AUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-647 | ctcatCAGCCACagc | GUGGCUGC | m7a | Created | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6736-5p | ctcaTCACCCAcagc | CUGGGUGA | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6741-5p | ctcatCACCCACagc | GUGGGUGC | m7a | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6748-5p | ctcatCACCCACAgc | UGUGGGUG | m8a | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-6759-5p | ctcatcACCCACAgc | UUGUGGGU | m7b | Disrupted | HPSD3_770_G1032.1_92941698 |
| hsa-miR-8075 | ctCATCAGCcacagc | UGCUGAUG | m7b | (m6b->m7b) | HPSD3_770_G1032.1_92941698 |