SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001127181
Gene Symbol: CENPL

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803164C>T COSM404313 LUAD-S01346 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aj-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTK7_833_G1143.1_173772302
hsa-miR-25-3p tttctttTGCAATac CAUUGCAC m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-363-3p tttctttTGCAATac AAUUGCAC m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-367-3p tttctttTGCAATac AAUUGCAC m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-518a-5p tttctTTTGCAatac CUGCAAAG m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-527 tttctTTTGCAatac CUGCAAAG m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-1468-3p tttcTTTTGCaatac AGCAAAAU m6b Created HPTK7_833_G1143.1_173772302
hsa-miR-548aw tttcTTTTGCAatac GUGCAAAA m7b Created HPTK7_833_G1143.1_173772302
hsa-miR-548f-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTK7_833_G1143.1_173772302
hsa-miR-548g-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTK7_833_G1143.1_173772302
hsa-miR-548x-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTK7_833_G1143.1_173772302

Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803163G>A COSM4869052 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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