SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001127181
Gene Symbol: CENPL

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803164C>T COSM404313 LUAD-S01346 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p tttcTTTTGCaatac AGCAAAAU m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-25-3p tttctttTGCAATac CAUUGCAC m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-363-3p tttctttTGCAATac AAUUGCAC m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-367-3p tttctttTGCAATac AAUUGCAC m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-518a-5p tttctTTTGCAatac CUGCAAAG m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-527 tttctTTTGCAatac CUGCAAAG m6b Created HPTA1_1277_G1725.1_173772303
hsa-miR-548aj-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTA1_1277_G1725.1_173772303
hsa-miR-548aw tttcTTTTGCAatac GUGCAAAA m7b Created HPTA1_1277_G1725.1_173772303
hsa-miR-548f-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTA1_1277_G1725.1_173772303
hsa-miR-548g-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTA1_1277_G1725.1_173772303
hsa-miR-548x-5p tttCTTTTGCAatac UGCAAAAG m8a Created HPTA1_1277_G1725.1_173772303
Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803163G>A COSM899784 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.173803153C>A COSM4874295 TCGA-AP-A0LD-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPTA1_1277_G1725.1_173772303
hsa-miR-326 atacatCCAGAGGat CCUCUGGG m7a Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-378j atacATCCAGaggat ACUGGAUU m6b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-432-3p ataCATCCAGaggat CUGGAUGG m7a Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-4782-5p atacATCCAGAggat UUCUGGAU m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-518c-5p atacaTCCAGAGgat UCUCUGGA m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-5706 atacATCCAGAggat UUCUGGAU m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-6780a-3p atacatcCAGAGGAt CUCCUCUG m7b Disrupted HPTA1_1277_G1725.1_173772303
hsa-miR-6881-3p atacatcAAGAGGAt AUCCUCUU m7b Created HPTA1_1277_G1725.1_173772303

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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