| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001114636 |
|---|---|
| Gene Symbol: | FANCL |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.58159457C>T | COSM4965379 | PCSI_0328_Pa_P_526 | [pancreas][NS][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-7109-3p | tGAGGCTTataaaat | CAAGCCUC | m7b | Created | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-556-5p | tgagGCTCATaaaat | GAUGAGCU | m6b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-6819-3p | tGAGGCTTataaaat | AAGCCUCU | m7a | Created | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-6823-3p | tGAGGCTCAtaaaat | UGAGCCUC | m8a | (m8a->m7a) | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.58159453A>G | COSM721447 | TCGA-18-3409-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-6758-3p | gctcataGAATGAGt | ACUCAUUC | m7b | Created | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-1250-3p | gctcatAAAATGagt | ACAUUUUC | m6b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-7159-3p | gctCATAGAAtgagt | UUUCUAUG | m7b | Created | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.58159426G>A | COSM4094952 | TCGA-BR-8590-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-548c-3p | tatagctGATTTTTt | CAAAAAUC | m7b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-34a-3p | tataGCTGATTtttt | CAAUCAGC | m7b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.58159418G>TG | COSM4740598 | T3152 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3613-3p | aTTTTTTGTgggaaa | ACAAAAAA | m8a | (m8a->m7a) | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-1260a | attttttGTGGGAaa | AUCCCACC | m6b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-1260b | attttttGTGGGAaa | AUCCCACC | m6b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-188-3p | atttttTGTGGGAaa | CUCCCACA | m7b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| hsa-miR-3156-3p | attttttGTGGGAaa | CUCCCACU | m6b | Disrupted | HHSJI_1499_Peak24285|5|0.1053|3|NM_001114636|FANCL |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr2:g.58159410C>T | COSM1021947 | TCGA-BS-A0TE-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |