SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001114634
Gene Symbol: PLAG1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166742C>T COSM1100660 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p AAATATCTgttcagt AGAUAUUU m8a Created HPKMA_14339_G16592.1_57079293
hsa-miR-887-3p aaatatCCGTTCAgt GUGAACGG m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-3145-3p AAATATCTgttcagt AGAUAUUU m8a Created HPKMA_14339_G16592.1_57079293
hsa-miR-887-3p aaatatCCGTTCAgt GUGAACGG m7b Disrupted HPKMA_14339_G16592.1_57079293

Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166741G>A COSM751123 TCGA-60-2722-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4724-5p aatatccGTTCAGTt AACUGAAC m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-887-3p aatatCCGTTCAgtt GUGAACGG m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-4724-5p aatatccGTTCAGTt AACUGAAC m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-887-3p aatatCCGTTCAgtt GUGAACGG m7b Disrupted HPKMA_14339_G16592.1_57079293

Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166736G>T COSM4972678 1N03-VS-1T03 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3646 ccgTTCATTTctacc AAAAUGAA m7b Created HPKMA_14339_G16592.1_57079293
hsa-miR-4724-5p ccGTTCAGTTctacc AACUGAAC m8a Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-5680 ccgttCATTTCTacc GAGAAAUG m7b Created HPKMA_14339_G16592.1_57079293
hsa-miR-3646 ccgTTCATTTctacc AAAAUGAA m7b Created HPKMA_14339_G16592.1_57079293
hsa-miR-4724-5p ccGTTCAGTTctacc AACUGAAC m8a Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-5680 ccgttCATTTCTacc GAGAAAUG m7b Created HPKMA_14339_G16592.1_57079293

Mutation Mutation ID Sample Name Cancer Type
chr8:g.56166727C>T COSM3925426 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7b-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7c-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7e-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7f-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7g-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7i-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-miR-202-3p tcTACCTCatatgca AGAGGUAU m6b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-4458 tCTACCTCatatgca AGAGGUAG m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-4500 tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-miR-548ag tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-548ai tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-548ba tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-570-5p tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-98-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7a-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7b-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7c-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7e-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7f-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7g-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-let-7i-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-miR-202-3p tcTACCTCatatgca AGAGGUAU m6b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-4458 tCTACCTCatatgca AGAGGUAG m7b Disrupted HPKMA_14339_G16592.1_57079293
hsa-miR-4500 tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293
hsa-miR-548ag tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-548ai tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-548ba tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-570-5p tcTACCTTatatgca AAAGGUAA m6b Created HPKMA_14339_G16592.1_57079293
hsa-miR-98-5p tCTACCTCAtatgca UGAGGUAG m8a (m8a->m7a) HPKMA_14339_G16592.1_57079293

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser