SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975503C>G COSM1621498 HCC53T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p tcaccaaCTGTTACa UGUAACAG m7b Disrupted HPTK7_6516_G9728.1_32943282
hsa-miR-3614-5p tcaCCAAGTGttaca CCACUUGG m7b Created HPTK7_6516_G9728.1_32943282

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975500C>T COSM3873052 TCGA-CG-4305-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-921 tgtTCACTAactgtt CUAGUGAG m6b Created HPTK7_6516_G9728.1_32943282
hsa-miR-3606-5p tgTTCACTAActgtt UUAGUGAA m8a Created HPTK7_6516_G9728.1_32943282
Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975452T>C COSM4161048 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975447AATT>A COSM1658844 PD3185a [salivary_gland][mouth_roof][carcinoma][adenoid_cystic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser