SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.32977821T>C COSM4934427 TCGA-DD-A39Y-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4463 ttaCCAGTCTCtact GAGACUGG m8a Disrupted HPRO7_2575_G4151.1_32945601
hsa-miR-485-5p ttacCAGCCTCTact AGAGGCUG m8a Created HPRO7_2575_G4151.1_32945601
hsa-miR-6832-5p ttaccagTCTCTACt AGUAGAGA m7b Disrupted HPRO7_2575_G4151.1_32945601
hsa-miR-6866-5p ttaccaGCCTCTAct UUAGAGGC m7b Created HPRO7_2575_G4151.1_32945601
hsa-miR-6884-5p ttacCAGCCTCTact AGAGGCUG m8a Created HPRO7_2575_G4151.1_32945601
hsa-miR-873-3p ttacCAGTCTCtact GGAGACUG m7b Disrupted HPRO7_2575_G4151.1_32945601
hsa-miR-133a-5p tTACCAGCctctact AGCUGGUA m7b Created HPRO7_2575_G4151.1_32945601
hsa-miR-3188 ttaccAGCCTCTact AGAGGCUU m7a Created HPRO7_2575_G4151.1_32945601
Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975452T>C COSM4161048 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975447AATT>A COSM1658844 PD3185a [salivary_gland][mouth_roof][carcinoma][adenoid_cystic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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