SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
	Home	Search	Help	Download

Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001113182
Gene Symbol:	BRD2

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr6:g.32975468G>A		COSM596051	TCGA-64-5778-01	[lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-4714-5p	tgctTCAGAGTgtat	AACUCUGA	m7b	Disrupted	HPKTB_8914_G11430.1_32943233
hsa-miR-146a-3p	tgcTTCAGAGtgtat	CCUCUGAA	m7b	Disrupted	HPKTB_8914_G11430.1_32943233
hsa-miR-127-5p	tGCTTCAGagtgtat	CUGAAGCU	m7a	Disrupted	HPKTB_8914_G11430.1_32943233

Mutation		Mutation ID	Sample Name	Cancer Type
chr6:g.32975452T>C		COSM4161048	PTC-7C	[thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr6:g.32975447AATT>A		COSM1658844	PD3185a	[salivary_gland][mouth_roof][carcinoma][adenoid_cystic_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser