SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001113182
Gene Symbol: BRD2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32979985C>T COSM1443705 TCGA-DM-A0X9-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-1-3p agttgTGTATATaat AUAUACAG m7a Created HPKMB_6638_G7630.1_32947756
hsa-miR-1185-2-3p agttgTGTATATaat AUAUACAG m7a Created HPKMB_6638_G7630.1_32947756
hsa-miR-190a-3p agttgtgTATATAat CUAUAUAU m6b Created HPKMB_6638_G7630.1_32947756
hsa-miR-466 agtTGTGTATataat AUACACAU m7a Created HPKMB_6638_G7630.1_32947756
hsa-miR-4731-3p agTTGTGTatataat CACACAAG m6b Created HPKMB_6638_G7630.1_32947756
hsa-miR-4789-5p agttGTGTATAtaat GUAUACAC m7b Created HPKMB_6638_G7630.1_32947756
hsa-miR-501-3p agttGTGCATataat AAUGCACC m6b Disrupted HPKMB_6638_G7630.1_32947756
hsa-miR-502-3p agttGTGCATataat AAUGCACC m6b Disrupted HPKMB_6638_G7630.1_32947756

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32979975C>T COSM3625570 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-551a agcTGGGTCGagttg GCGACCCA m7b Created HPKMB_6638_G7630.1_32947756
hsa-miR-551b-3p agcTGGGTCGagttg GCGACCCA m7b Created HPKMB_6638_G7630.1_32947756
hsa-miR-6075 agcTGGGCCGagttg ACGGCCCA m7b Disrupted HPKMB_6638_G7630.1_32947756

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32977489T>C COSM3994872 TCGA-G7-7502-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p ttgCTGCTGatgtac ACAGCAGG m6b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-3617-3p ttgcTGCTGATGtac CAUCAGCA m8a Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-424-5p tTGCTGCTGatgtac CAGCAGCA m8a (m8a->m7a) HPKMB_6637_G7629.1_32945257
hsa-miR-4291 ttgCTGCTGAtgtac UUCAGCAG m7b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-497-5p tTGCTGCTGatgtac CAGCAGCA m8a (m8a->m7a) HPKMB_6637_G7629.1_32945257
hsa-miR-499a-3p ttgctgcTGATGTac AACAUCAC m6b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-499b-3p ttgctgcTGATGTac AACAUCAC m6b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-6838-5p tTGCTGCTgatgtac AAGCAGCA m7b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-761 ttgCTGCTGatgtac GCAGCAGG m6b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-922 ttgCTGCTGatgtac GCAGCAGA m6b Disrupted HPKMB_6637_G7629.1_32945257

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32977467G>T COSM3873056 TCGA-BR-6457-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p gattaccGGGATGCa CGCAUCCC m7b Disrupted HPKMB_6637_G7629.1_32945257
hsa-miR-4783-3p gattACCGGGatgca CCCCGGUG m6b Disrupted HPKMB_6637_G7629.1_32945257

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32975468G>A COSM596051 TCGA-64-5778-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p tGCTTCAGagtgtat CUGAAGCU m7a Disrupted HPKMB_6636_G7628.1_32943231
hsa-miR-146a-3p tgcTTCAGAGtgtat CCUCUGAA m7b Disrupted HPKMB_6636_G7628.1_32943231
hsa-miR-4714-5p tgctTCAGAGTgtat AACUCUGA m7b Disrupted HPKMB_6636_G7628.1_32943231

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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