SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001105539
Gene Symbol: ZBTB10

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.80499736T>C COSM486687 TCGA-CZ-5989-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p aaaacaACACTACcc UGUAGUGU m7b Created HPRO7_2995_G4810.1_81411975
hsa-miR-4255 aaaacAACACTaccc CAGUGUUC m6b Created HPRO7_2995_G4810.1_81411975

Mutation Mutation ID Sample Name Cancer Type
chr8:g.80499724T>G COSM1458341 TCGA-AD-6548-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-659-3p aaagcccGAACCAAa CUUGGUUC m7b Created HPRO7_2995_G4810.1_81411975
hsa-miR-3181 aaaGCCCGAaccaaa AUCGGGCC m6b Created HPRO7_2995_G4810.1_81411975
hsa-miR-218-1-3p aaagcccGAACCAaa AUGGUUCC m6b Created HPRO7_2995_G4810.1_81411975
hsa-miR-27a-5p aAAGCCCTaaccaaa AGGGCUUA m7a Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-2909 aaaGCCCTAACcaaa GUUAGGGC m8a Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-3158-3p aAAGCCCTaaccaaa AAGGGCUU m7b Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-3944-3p aaAGCCCGAAccaaa UUCGGGCU m8a Created HPRO7_2995_G4810.1_81411975
hsa-miR-4446-3p aaAGCCCTaaccaaa CAGGGCUG m6b Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-4750-5p aaaGCCCGAaccaaa CUCGGGCG m6b Created HPRO7_2995_G4810.1_81411975
hsa-miR-487a-5p aaagcccTAACCAaa GUGGUUAU m6b Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-487b-5p aaagcccTAACCAaa GUGGUUAU m6b Disrupted HPRO7_2995_G4810.1_81411975
hsa-miR-5088-5p aaAGCCCTaaccaaa CAGGGCUC m6b Disrupted HPRO7_2995_G4810.1_81411975

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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