SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001102402
Gene Symbol: PCTP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.55776075G>C COSM473072 TCGA-B8-4151-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6719-3p agagccTGTCAGAac UCUGACAU m7a Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-484 aGAGCCTGtcagaac UCAGGCUC m7b Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-4526 agagcCTGTCAGaac GCUGACAG m7b Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-6730-3p agagccTGTCAGaac CCUGACAC m6b Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-6761-5p agagcCTCTCAGAac UCUGAGAG m8a Created HPKMB_3396_G3865.1_53853436
hsa-miR-4251 agagccTCTCAGaac CCUGAGAA m6b Created HPKMB_3396_G3865.1_53853436
hsa-miR-2467-5p aGAGCCTCtcagaac UGAGGCUC m7b Created HPKMB_3396_G3865.1_53853436
hsa-miR-3660 agagcCTGTCAGaac ACUGACAG m7b Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-4256 agagcctGTCAGAac AUCUGACC m6b Disrupted HPKMB_3396_G3865.1_53853436
hsa-miR-4329 agagccTCTCAGaac CCUGAGAC m6b Created HPKMB_3396_G3865.1_53853436
hsa-miR-4438 agAGCCTGTcagaac CACAGGCU m7b (m7b->m6b) HPKMB_3396_G3865.1_53853436

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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