SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001100814
Gene Symbol: TMEM55B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458620T>G COSM1514953 TCGA-55-6972-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3136-3p ctgtgtTTGGGCCgg UGGCCCAA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-5699-5p ctgtgTTGGGGCcgg UGCCCCAA m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6075 ctgtgttTGGGCCGg ACGGCCCA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6793-3p ctgtGTTGGGGccgg UCCCCAAC m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-7155-3p ctgtgtTTGGGCCgg UGGCCCAA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-874-5p ctgtgtTGGGGCCGg CGGCCCCA m8a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458616C>T COSM1514954 TCGA-55-7815-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3136-3p gtTTGGGCCgggctc UGGCCCAA m7b (m7b->m6b) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-3940-3p gtttgggCCGGGCTc CAGCCCGG m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-551a gttTGGGTCGggctc GCGACCCA m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-551b-3p gttTGGGTCGggctc GCGACCCA m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6075 gttTGGGCCGggctc ACGGCCCA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-7155-3p gtTTGGGCCgggctc UGGCCCAA m7b (m7b->m6b) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458612G>A COSM2029145 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 gggccggGCTCTTTa UAAAGAGC m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-3940-3p gggCCGGGCTcttta CAGCCCGG m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458609C>T COSM3494702 TCGA-FS-A1ZW-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 ccggGCTCTTTAttg UAAAGAGC m8a Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4311 ccgggCTCTTTattg GAAAGAGA m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-583 ccgggCTCTTTattg CAAAGAGG m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458588G>C COSM241943 WA13 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p tATGAAGGtcagcca UCCUUCAU m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-27b-5p tatgAAGCTCagcca AGAGCUUA m6b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4663 tatgaaGCTCAGCca AGCUGAGC m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-8077 tatgaagCTCAGCCa GGCUGAGU m7a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458581A>T COSM1514955 TCGA-95-7043-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1321 gtcagCCTCCCTGtc CAGGGAGG m8a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-3929 gTCAGCCTCcctgtc GAGGCUGA m8a (m7a->m8a) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4270 gtcagcCTCCCTGtc UCAGGGAG m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4419b gTCAGCCTCcctgtc GAGGCUGA m8a (m7a->m8a) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4441 gtcagcCTCCCTGTc ACAGGGAG m8a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4478 gTCAGCCTCcctgtc GAGGCUGA m8a (m7a->m8a) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4739 gtcagCCTCCCTgtc AAGGGAGG m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4756-5p gtcagCCTCCCTGtc CAGGGAGG m8a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-485-5p gtCAGCCTCcctgtc AGAGGCUG m7b (m6b->m7b) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6754-5p gtcagcCTCCCTGtc CCAGGGAG m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6884-5p gtCAGCCTCcctgtc AGAGGCUG m7b (m6b->m7b) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458581A>C COSM3814431 TCGA-A8-A0A6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-185-3p gtCAGCCCCcctgtc AGGGGCUG m7b (m6b->m7b) HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-328-5p gtcaGCCCCCCtgtc GGGGGGGC m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4656 gTCAGCCCccctgtc UGGGCUGA m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6798-5p gtcagcCCCCCTGtc CCAGGGGG m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6846-5p gtcAGCCCCCctgtc UGGGGGCU m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6848-5p gtcAGCCCCCctgtc UGGGGGCU m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6885-5p gtcaGCCCCCCTgtc AGGGGGGC m8a Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458571G>T COSM954255 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p ctgtccAGAACTTct AAAGUUCU m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-148b-5p ctgtcCAGAACTTct AAGUUCUG m8a Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378a-3p ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378b ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378c ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378d ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378e ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378f ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378h ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-378i ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-422a ctGTCCAGaacttct ACUGGACU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4638-3p cTGTCCAGaacttct CCUGGACA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4670-3p ctgtccaTAACTTCt UGAAGUUA m7b Created HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-516b-5p ctgTCCAGAacttct AUCUGGAG m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-6874-3p ctgtcCAGAACTtct CAGUUCUG m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458565C>A COSM3706167 BN43T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4433a-3p agaacttCTCCTGag ACAGGAGU m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4434 agaaCTTCTCCTgag AGGAGAAG m8a Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4459 agaacttCTCCTGag CCAGGAGG m6b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4516 agaaCTTCTCCtgag GGGAGAAG m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-4768-3p agaactTCTCCTGag CCAGGAGA m7b Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B
hsa-miR-5703 agaaCTTCTCCTgag AGGAGAAG m8a Disrupted HHSJI_764_Peak29618|5|0.0617|4|NM_001100814|TMEM55B

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20458125C>T COSN1639518 RK133_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4329 gctctgGTCTCAGta CCUGAGAC m7b Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4649-3p gctctgGCCTCAGta UCUGAGGC m7b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4786-5p gctcTGGTCTCAgta UGAGACCA m8a Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-6089 gctctGGCCTCagta GGAGGCCG m6b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4329 gctctgGTCTCAGta CCUGAGAC m7b Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4649-3p gctctgGCCTCAGta UCUGAGGC m7b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4786-5p gctcTGGTCTCAgta UGAGACCA m8a Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-6089 gctctGGCCTCagta GGAGGCCG m6b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4329 gctctgGTCTCAGta CCUGAGAC m7b Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4649-3p gctctgGCCTCAGta UCUGAGGC m7b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-4786-5p gctcTGGTCTCAgta UGAGACCA m8a Created HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B
hsa-miR-6089 gctctGGCCTCagta GGAGGCCG m6b Disrupted HHSJI_763_Peak1119|15|0.1749|4|NM_001100814|TMEM55B

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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