SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001100411
Gene Symbol: FAM184A

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.119024464G>A COSM202354 TCGA-AA-3710-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 aaATTACAGagcttt CUGUAAUA m7a (m6a->m7a) HPTA3_16853_G26950.1_119345620
hsa-miR-3607-3p aaaTTACAGagcttt ACUGUAAA m6b Created HPTA3_16853_G26950.1_119345620
hsa-miR-3686 aaaTTACAGAgcttt AUCUGUAA m7b Created HPTA3_16853_G26950.1_119345620
hsa-miR-6796-3p aaattacAGAGCTTt GAAGCUCU m7b Created HPTA3_16853_G26950.1_119345620

Mutation Mutation ID Sample Name Cancer Type
chr6:g.119024460C>T COSM3429931 TCGA-EI-6884-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1323 tacggAGTTTTGgac UCAAAACU m7b Created HPTA3_16853_G26950.1_119345620
hsa-miR-548o-3p tacggAGTTTTGGac CCAAAACU m8a Created HPTA3_16853_G26950.1_119345620

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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