SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099639
Gene Symbol: ZNF146

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236936G>T COSM140835 cSCCP8 [skin][ear][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aj-5p agcCTTTTGCcagaa UGCAAAAG m7b Created HPKMA_7502_G8674.1_36727842
hsa-miR-4799-3p agcctttTGCCAGaa ACUGGCAU m6b Created HPKMA_7502_G8674.1_36727842
hsa-miR-4720-5p agcctttTGCCAGaa CCUGGCAU m6b Created HPKMA_7502_G8674.1_36727842
hsa-miR-548f-5p agcCTTTTGCcagaa UGCAAAAG m7b Created HPKMA_7502_G8674.1_36727842
hsa-miR-3926 agccTTTGGCCAgaa UGGCCAAA m8a Disrupted HPKMA_7502_G8674.1_36727842
hsa-miR-3922-3p agcctttGGCCAGAa UCUGGCCU m7a Disrupted HPKMA_7502_G8674.1_36727842
hsa-miR-3190-5p agccttTGGCCAGAa UCUGGCCA m8a Disrupted HPKMA_7502_G8674.1_36727842
hsa-miR-548g-5p agcCTTTTGCcagaa UGCAAAAG m7b Created HPKMA_7502_G8674.1_36727842
hsa-miR-548s agcctTTGGCCAgaa AUGGCCAA m7b Disrupted HPKMA_7502_G8674.1_36727842
hsa-miR-548x-5p agcCTTTTGCcagaa UGCAAAAG m7b Created HPKMA_7502_G8674.1_36727842
hsa-miR-5588-5p agcctttTGCCAGaa ACUGGCAU m6b Created HPKMA_7502_G8674.1_36727842
hsa-miR-6868-5p agcctttTGCCAGaa ACUGGCAG m6b Created HPKMA_7502_G8674.1_36727842
hsa-miR-3176 agcctttGGCCAGaa ACUGGCCU m6b Disrupted HPKMA_7502_G8674.1_36727842
hsa-miR-3128 agccttTTGCCAGAa UCUGGCAA m8a Created HPKMA_7502_G8674.1_36727842

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236933T>C COSM3892383 TCGA-EE-A3J4-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4446-3p aaCAGCCCTtggcca CAGGGCUG m7b (m6b->m7b) HPKMA_7502_G8674.1_36727842
hsa-miR-3926 aacagccTTTGGCCa UGGCCAAA m7b Disrupted HPKMA_7502_G8674.1_36727842

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser