SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099639
Gene Symbol: ZNF146

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236582G>A COSM995407 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-3p atgtaacAAGTGTGg ACACACUU m7b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6500-3p atgtaACAAGTGTgg ACACUUGU m8a Created HHRBL_7547_BCBL1-2of3-SCL_14970

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236574A>T COSM4602016 WSU-HN6 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-181b-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-181c-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-181d-5p cctttTGAATGTaac AACAUUCA m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-4262 cctttTGAATGTaac GACAUUCA m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236569T>G COSM1304467 TCGA-BT-A20R-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-553 agaaACCGTTTgaat AAAACGGU m7b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6715b-3p agaaaccGTTTGAat CUCAAACC m6b Created HHRBL_7547_BCBL1-2of3-SCL_14970

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236563G>T COSM995406 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p cgAGAGATaaacctt CAUCUCUA m6b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-4768-5p cgaGAGAGAAacctt AUUCUCUC m7b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6809-3p cgagAGAGAAacctt CUUCUCUU m6b Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6817-3p cgAGAGAGAaacctt UCUCUCUG m7a (m7a->m6a) HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6833-3p cgaGAGAGAAAcctt UUUCUCUC m8a Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6873-3p cgAGAGAGAAacctt UUCUCUCU m8a Disrupted HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-7110-3p cGAGAGAGAaacctt UCUCUCUC m8a (m8a->m7a) HHRBL_7547_BCBL1-2of3-SCL_14970

Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236556C>G COSM711832 TCGA-22-5480-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-5p tttCACAGGagagag CCCUGUGC m6b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-1976 tttcaCAGGAGagag CCUCCUGC m6b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-3653-5p tttcaCAGGAGagag CCUCCUGA m6b Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-4279 tttcacAGGAGAGag CUCUCCUC m7a Created HHRBL_7547_BCBL1-2of3-SCL_14970
hsa-miR-6845-3p tttcacAGGAGAGag CCUCUCCU m7b Created HHRBL_7547_BCBL1-2of3-SCL_14970

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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