SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001099402
Gene Symbol: CCNK

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr14:g.99502287A>G COSM433575 TCGA-E2-A15L-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-557 ttGTGCAAAtttgaa GUUUGCAC m7b (m7b->m6b) HPKMB_2389_G2716.1_99968616
hsa-miR-507 ttGTGCAAAtttgaa UUUUGCAC m7b (m7b->m6b) HPKMB_2389_G2716.1_99968616
hsa-miR-4762-5p ttgtgcAGATTTGaa CCAAAUCU m7b Created HPKMB_2389_G2716.1_99968616

Mutation Mutation ID Sample Name Cancer Type
chr14:g.99502278G>T COSM959483 TCGA-B5-A11O-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-3p gcaGGACTTTtgtgc CAAAGUCC m7b Created HPKMB_2389_G2716.1_99968616
hsa-miR-6838-3p gCAGGACTTttgtgc AAGUCCUG m8a (m7a->m8a) HPKMB_2389_G2716.1_99968616

Mutation Mutation ID Sample Name Cancer Type
chr14:g.99502270C>T COSM959482 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-3p tgtatCTTGCAGgac UCUGCAAG m7b Created HPKMB_2389_G2716.1_99968616
hsa-miR-4772-3p tgtatcTTGCAGGac CCUGCAAC m7a Created HPKMB_2389_G2716.1_99968616
hsa-miR-6068 tgtatCTCGCAGGac CCUGCGAG m8a Disrupted HPKMB_2389_G2716.1_99968616

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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