SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099272
Gene Symbol: BTBD9

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.38345023T>C COSM3076775 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6792-5p atgtaTGCTTACaaa GUAAGCAG m7a Created HPRT3_22509_G30058.1_38312792
hsa-miR-5689 aTGTATGCTtacaaa AGCAUACA m8a (m7a->m8a) HPRT3_22509_G30058.1_38312792
hsa-miR-30e-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30d-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30c-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30b-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30a-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-6792-5p atgtaTGCTTACaaa GUAAGCAG m7a Created HPRT3_22509_G30058.1_38312792
hsa-miR-5689 aTGTATGCTtacaaa AGCAUACA m8a (m7a->m8a) HPRT3_22509_G30058.1_38312792
hsa-miR-30e-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30d-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30c-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30b-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-30a-5p atgtaTGTTTACAaa UGUAAACA m8a Disrupted HPRT3_22509_G30058.1_38312792

Mutation Mutation ID Sample Name Cancer Type
chr6:g.38345016A>G COSM279217 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8068 tttACAAACAaaacc UGUUUGUU m7a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-8068 tttACAAACAaaacc UGUUUGUU m7a Disrupted HPRT3_22509_G30058.1_38312792
hsa-miR-6885-3p tttacAAGCAAAacc CUUUGCUU m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-1273e tttaCAAGCAAaacc UUGCUUGA m7a Created HPRT3_22509_G30058.1_38312792
hsa-miR-19b-2-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-19b-1-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-19a-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-6885-3p tttacAAGCAAAacc CUUUGCUU m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-1273e tttaCAAGCAAaacc UUGCUUGA m7a Created HPRT3_22509_G30058.1_38312792
hsa-miR-19b-2-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-19b-1-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792
hsa-miR-19a-5p tttacaaGCAAAACc AGUUUUGC m7b Created HPRT3_22509_G30058.1_38312792

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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