SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001098796
Gene Symbol: TOX2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.44068678C>T COSM3546817 TCGA-GN-A265-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7b-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7c-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7d-5p gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7e-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7f-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7g-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7i-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-1294 gctctACCTCACcta UGUGAGGU m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-202-3p gctcTACCTCaccta AGAGGUAU m6b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-3927-3p gcTCTACCTcaccta CAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-4458 gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4500 gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4710 gctctaCCTCACCta GGGUGAGG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-548ao-5p gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-548ax gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-6831-5p gcTCTACCTcaccta UAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-98-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7a-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7b-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7c-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7d-5p gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7e-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7f-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7g-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7i-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-1294 gctctACCTCACcta UGUGAGGU m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-202-3p gctcTACCTCaccta AGAGGUAU m6b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-3927-3p gcTCTACCTcaccta CAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-4458 gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4500 gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4710 gctctaCCTCACCta GGGUGAGG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-548ao-5p gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-548ax gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-6831-5p gcTCTACCTcaccta UAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-98-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7a-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7b-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7c-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7d-5p gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7e-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7f-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7g-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-let-7i-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-1294 gctctACCTCACcta UGUGAGGU m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-202-3p gctcTACCTCaccta AGAGGUAU m6b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-3927-3p gcTCTACCTcaccta CAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-4458 gctCTACCTCaccta AGAGGUAG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4500 gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4710 gctctaCCTCACCta GGGUGAGG m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-548ao-5p gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-548ax gctcTACTTCaccta AGAAGUAA m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-6831-5p gcTCTACCTcaccta UAGGUAGA m7b (m7b->m6b) HPTA3_11830_G18709.1_42697313
hsa-miR-98-5p gctCTACCTCAccta UGAGGUAG m8a Disrupted HPTA3_11830_G18709.1_42697313

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44068671G>A COSM3841069 TCGA-A2-A04N-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4732-5p acaaatcGCTCTACc UGUAGAGC m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4765 acaaATCACTCtacc UGAGUGAU m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-5586-3p acaaaTCACTCTacc CAGAGUGA m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-8062 acaAATCACTctacc CAGUGAUU m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-4732-5p acaaatcGCTCTACc UGUAGAGC m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4765 acaaATCACTCtacc UGAGUGAU m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-5586-3p acaaaTCACTCTacc CAGAGUGA m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-8062 acaAATCACTctacc CAGUGAUU m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-4732-5p acaaatcGCTCTACc UGUAGAGC m7b Disrupted HPTA3_11830_G18709.1_42697313
hsa-miR-4765 acaaATCACTCtacc UGAGUGAU m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-5586-3p acaaaTCACTCTacc CAGAGUGA m7b Created HPTA3_11830_G18709.1_42697313
hsa-miR-8062 acaAATCACTctacc CAGUGAUU m7b Created HPTA3_11830_G18709.1_42697313

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44068670C>T COSM3546815 TCGA-BF-A1Q0-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2278 gacaaatTGCTCTac GAGAGCAG m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-2278 gacaaatTGCTCTac GAGAGCAG m6b Created HPTA3_11830_G18709.1_42697313
hsa-miR-2278 gacaaatTGCTCTac GAGAGCAG m6b Created HPTA3_11830_G18709.1_42697313

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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