SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001098526
Gene Symbol: AMICA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.118221731T>C COSN5896432 RK210_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-711 ccTGGGTCCaattcc GGGACCCA m7b (m6b->m7b) HPKMA_2692_G3131.1_118092432
hsa-miR-1180-5p ccTGGGTCCaattcc GGACCCAC m7a (m6a->m7a) HPKMA_2692_G3131.1_118092432
hsa-miR-4776-5p cctgGGTCCAattcc GUGGACCA m6b Created HPKMA_2692_G3131.1_118092432
hsa-miR-4535 cctgGGTCCAattcc GUGGACCU m6b Created HPKMA_2692_G3131.1_118092432
hsa-miR-1273d ccTGGGTTCaattcc GAACCCAU m7a (m7a->m6a) HPKMA_2692_G3131.1_118092432

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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