SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001083538
Gene Symbol: POTEE

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.131263831C>T COSM4133111 PTC-46C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4289 tctACAATGagctgc GCAUUGUG m6b Created HPTA1_6538_G9204.1_132021387

Mutation Mutation ID Sample Name Cancer Type
chr2:g.131263828C>CA COSM1399418 TCGA-AD-6964-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3674 cctTCTACAAcgagc AUUGUAGA m7b Disrupted HPTA1_6538_G9204.1_132021387
hsa-miR-8068 ccttctACAAACgagc UGUUUGUU m6b Created HPTA1_6538_G9204.1_132021387

Mutation Mutation ID Sample Name Cancer Type
chr2:g.131263821C>T COSM4479856 CSCC-20-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-5p caccacATCTTCTac AGAAGAUU m7a Created HPTA1_6538_G9204.1_132021387
hsa-miR-5197-3p caccacaTCTTCTac AAGAAGAG m6b Created HPTA1_6538_G9204.1_132021387
hsa-miR-576-3p cacCACATCTTctac AAGAUGUG m8a Created HPTA1_6538_G9204.1_132021387
hsa-miR-3154 caccacaCCTTCTac CAGAAGGG m6b Disrupted HPTA1_6538_G9204.1_132021387

Mutation Mutation ID Sample Name Cancer Type
chr2:g.131263815AC>A COSM391646 LUAD-F00121 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 atctggcACACACCT AGGUGUGU m8a Created HPTA1_6538_G9204.1_132021387
hsa-miR-550b-2-5p atctGGCACAcacct AUGUGCCU m6b Created HPTA1_6538_G9204.1_132021387
hsa-miR-6818-5p atctggCACACAcct UUGUGUGA m6b Created HPTA1_6538_G9204.1_132021387
hsa-miR-6867-5p atctggCACACACct UGUGUGUG m7b Created HPTA1_6538_G9204.1_132021387

Mutation Mutation ID Sample Name Cancer Type
chr2:g.131263814C>T COSM4595789 NOKSI [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 gatctGGTACCAcac AUGGUACC m7b Created HPTA1_6538_G9204.1_132021387

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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