SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001083535
Gene Symbol: CEP57L1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.109162924A>G COSM3857357 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8087 gttcatAGTCTTCaa GAAGACUU m7a Created HPTK7_6609_G9888.1_109484115
hsa-miR-4699-5p gttcatAATCTTCaa AGAAGAUU m7b Disrupted HPTK7_6609_G9888.1_109484115

Mutation Mutation ID Sample Name Cancer Type
chr6:g.109162914C>T COSM593996 TCGA-GV-A3QG-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6750-3p tccaataTGAGTTCa GAACUCAC m7a Created HPTK7_6609_G9888.1_109484115
hsa-miR-1279 tcCAATATGAgttca UCAUAUUG m8a Created HPTK7_6609_G9888.1_109484115

Mutation Mutation ID Sample Name Cancer Type
chr6:g.109162905C>T COSM3619363 TCGA-EE-A2MU-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6744-5p cagcttTCATCCAat UGGAUGAC m7a Disrupted HPTK7_6609_G9888.1_109484115
hsa-miR-432-3p cagctttCATCCAat CUGGAUGG m6b Disrupted HPTK7_6609_G9888.1_109484115
hsa-miR-1255b-5p cagcttTCATCCaat CGGAUGAG m6b Disrupted HPTK7_6609_G9888.1_109484115
hsa-miR-1261 cagcttTTATCCAat AUGGAUAA m7b Created HPTK7_6609_G9888.1_109484115
hsa-miR-320a CAGCTTTTatccaat AAAAGCUG m8a Created HPTK7_6609_G9888.1_109484115
hsa-miR-320b CAGCTTTTatccaat AAAAGCUG m8a Created HPTK7_6609_G9888.1_109484115
hsa-miR-320c CAGCTTTTatccaat AAAAGCUG m8a Created HPTK7_6609_G9888.1_109484115
hsa-miR-320d CAGCTTTTatccaat AAAAGCUG m8a Created HPTK7_6609_G9888.1_109484115
hsa-miR-1255a cagcttTCATCCaat AGGAUGAG m6b Disrupted HPTK7_6609_G9888.1_109484115
hsa-miR-4429 CAGCTTTTatccaat AAAAGCUG m8a Created HPTK7_6609_G9888.1_109484115

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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