SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001082480
Gene Symbol: ZNF623

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651375C>T COSM1096998 TCGA-B5-A1MY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302c-5p ctacaaATGTTAAAa UUUAACAU m8a Created HPSLC_19122_G22787.1_144733535
hsa-miR-3143 ctacaAATGTTAaaa AUAACAUU m7b Created HPSLC_19122_G22787.1_144733535
hsa-miR-543 ctacaAATGTTaaaa AAACAUUC m6b Created HPSLC_19122_G22787.1_144733535

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651366A>C COSM3834191 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6849-5p ttaacTCCACTacaa GAGUGGAU m6b Created HPSLC_19122_G22787.1_144733535
hsa-miR-6073 ttaactcCACTACaa GGUAGUGA m6b Created HPSLC_19122_G22787.1_144733535
hsa-miR-142-3p ttaactcCACTACAa UGUAGUGU m7a Created HPSLC_19122_G22787.1_144733535
hsa-miR-4653-3p tTAACTCCActacaa UGGAGUUA m8a (m7a->m8a) HPSLC_19122_G22787.1_144733535
hsa-miR-4703-3p ttaactCAACTACAa UGUAGUUG m8a Disrupted HPSLC_19122_G22787.1_144733535

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651363C>T COSM4801039 CHC218T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4424 attTTAACTCaacta AGAGUUAA m7b Disrupted HPSLC_19122_G22787.1_144733535
hsa-miR-183-3p atttTAATTCAacta GUGAAUUA m7b Created HPSLC_19122_G22787.1_144733535

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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