SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001082480
Gene Symbol: ZNF623

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651166G>A COSM278379 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p gcccttcGAATGTaa AACAUUCA m6b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-181b-5p gcccttcGAATGTaa AACAUUCA m6b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-181c-5p gcccttcGAATGTaa AACAUUCA m6b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-181d-5p gcccttcGAATGTaa AACAUUCA m6b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-4262 gcccttcGAATGTaa GACAUUCA m6b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-6126 gcCCTTCAaatgtaa GUGAAGGC m6b Created HPKMA_14229_G16466.1_144733333
hsa-miR-6864-5p gCCCTTCAAatgtaa UUGAAGGG m8a (m7a->m8a) HPKMA_14229_G16466.1_144733333

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651165C>T COSM4744467 T3535 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p ggcccttTGAATGTa AACAUUCA m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-181b-5p ggcccttTGAATGTa AACAUUCA m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-181c-5p ggcccttTGAATGTa AACAUUCA m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-181d-5p ggcccttTGAATGTa AACAUUCA m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-4262 ggcccttTGAATGTa GACAUUCA m7b Created HPKMA_14229_G16466.1_144733333

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651161C>T COSM3432190 TCGA-EI-6512-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2861 gaCAGGCCCttcgaa GGGGCCUG m7b (m7b->m6b) HPKMA_14229_G16466.1_144733333
hsa-miR-4512 gacAGGCCCTtcgaa CAGGGCCU m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-6735-3p gACAGGCCcttcgaa AGGCCUGU m7b Disrupted HPKMA_14229_G16466.1_144733333

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651158G>T COSM3897467 TCGA-CG-5723-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-5p gggGACAGGCccttc UGCCUGUC m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-2861 ggggaCAGGCCCttc GGGGCCUG m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-4253 ggggaCATGCCCTtc AGGGCAUG m8a Created HPKMA_14229_G16466.1_144733333
hsa-miR-4512 ggggacAGGCCCTtc CAGGGCCU m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-4761-3p ggggacATGCCCTtc GAGGGCAU m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-6735-3p ggggACAGGCCcttc AGGCCUGU m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-6748-3p ggGGACAGGcccttc UCCUGUCC m7b (m7b->m6b) HPKMA_14229_G16466.1_144733333
hsa-miR-6834-3p gGGGACATgcccttc UAUGUCCC m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-6862-5p ggggaCATGCCCttc CGGGCAUG m7b Created HPKMA_14229_G16466.1_144733333

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143651149C>G COSM4973941 1N29-VS-1T29 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p atcCACTGTGgggac UCACAGUG m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-216a-3p atcCACTGTGgggac UCACAGUG m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-2355-5p atccactCTGGGGAc AUCCCCAG m7b Disrupted HPKMA_14229_G16466.1_144733333
hsa-miR-3681-3p atcCACTGTGgggac ACACAGUG m7b Created HPKMA_14229_G16466.1_144733333
hsa-miR-4286 atccactGTGGGGac ACCCCACU m6b Created HPKMA_14229_G16466.1_144733333
hsa-miR-759 atcCACTCTGgggac GCAGAGUG m7b Disrupted HPKMA_14229_G16466.1_144733333

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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