SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001082480
Gene Symbol: ZNF623

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.143650280G>A COSM150560 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p tTAATTCAgacctag GUGAAUUA m7b Created HPHES_8104_G10797.1_144732436
hsa-miR-4680-3p ttAATTCAGAcctag UCUGAAUU m8a Created HPHES_8104_G10797.1_144732436
hsa-miR-5187-3p ttaATTCAGacctag ACUGAAUC m6b Created HPHES_8104_G10797.1_144732436
hsa-miR-6503-5p ttaattCAGACCTag AGGUCUGC m7a Created HPHES_8104_G10797.1_144732436
Mutation Mutation ID Sample Name Cancer Type
chr8:g.143650279C>T COSM3646094 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.143650266T>C COSM4587830 07-P1079 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p caaAACCCTCacgtt GAGGGUUG m7a Created HPHES_8104_G10797.1_144732436
hsa-miR-329-5p cAAAACCTtcacgtt GAGGUUUU m7b Disrupted HPHES_8104_G10797.1_144732436

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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