SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080508
Gene Symbol: TBX18

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737333C>T COSM1547343 TCGA-99-7458-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3125 tgtctggTTCCTCTt UAGAGGAA m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-3914 tgtctGGTTCCTctt AAGGAACC m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-3916 tgtctggTTCCTCTt AAGAGGAA m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-3928-3p tgtctgGTTCCTCtt GGAGGAAC m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-505-5p tgtcTGGCTCCtctt GGGAGCCA m7b Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-6859-5p tgtctggTTCCTCTt GAGAGGAA m7b Created HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737328C>G COSM4460852 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-451b ggctccTCTTGCTcc UAGCAAGA m7b Disrupted HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737326T>C COSM1446217 TCGA-AA-3662-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-451b ctccTCTTGCTcctc UAGCAAGA m7b Disrupted HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737325G>T COSM72927 TCGA-13-0923-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150b-3p tcctcttTCTCCTCt UGAGGAGA m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-451b tccTCTTGCTcctct UAGCAAGA m7b Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-4784 tcctcttTCTCCTCt UGAGGAGA m7b Created HPRT3_22668_G30264.1_85447036
hsa-miR-583 tCCTCTTTctcctct CAAAGAGG m7b Created HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737325G>A COSM3875885 TCGA-BR-A4QL-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-451b tccTCTTGCTcctct UAGCAAGA m7b Disrupted HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737312C>A COSM1547344 TCGA-44-7670-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3714 ctcCTGCCTTCcatc GAAGGCAG m8a Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-4722-5p CTCCTGCCttccatc GGCAGGAG m8a Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-605-3p ctccTGCCTTCcatc AGAAGGCA m7b Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-613 ctcctgCATTCCatc AGGAAUGU m6b Created HPRT3_22668_G30264.1_85447036
hsa-miR-6808-5p ctCCTGCCTtccatc CAGGCAGG m7b (m7b->m6b) HPRT3_22668_G30264.1_85447036
hsa-miR-6893-5p ctCCTGCCTtccatc CAGGCAGG m7b (m7b->m6b) HPRT3_22668_G30264.1_85447036
hsa-miR-940 ctCCTGCCTTccatc AAGGCAGG m8a Disrupted HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84737309C>A COSM484407 TCGA-AS-3778-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3714 CTGCCTTCcatctgg GAAGGCAG m8a Disrupted HPRT3_22668_G30264.1_85447036
hsa-miR-605-3p cTGCCTTCcatctgg AGAAGGCA m7b Disrupted HPRT3_22668_G30264.1_85447036

Mutation Mutation ID Sample Name Cancer Type
chr6:g.84733016T>A COSN9810677 AOCS-104-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4735-5p aaaaAAATTAGctgc CCUAAUUU m7b Disrupted HPRT3_22666_G30262.1_85442721
hsa-miR-4775 aaaAAAATTAgctgc UUAAUUUU m7b Disrupted HPRT3_22666_G30262.1_85442721

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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