SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080496
Gene Symbol: RGP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.35752748G>A COSM462395 TCGA-EX-A1H5-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3934-5p cCACCTGAacaggac UCAGGUGU m7a Created HPSD3_10152_G13765.1_35752745
hsa-miR-1266-3p ccacctGAACAGGac CCCUGUUC m7b Created HPSD3_10152_G13765.1_35752745
hsa-miR-198 ccacCTGGACaggac GGUCCAGA m6b Disrupted HPSD3_10152_G13765.1_35752745
hsa-miR-26b-3p ccacctGAACAGGac CCUGUUCU m7a Created HPSD3_10152_G13765.1_35752745
hsa-miR-4421 ccacctgGACAGGac ACCUGUCU m6b Disrupted HPSD3_10152_G13765.1_35752745
hsa-miR-6748-3p ccacctGGACAGGAc UCCUGUCC m8a Disrupted HPSD3_10152_G13765.1_35752745
hsa-miR-3934-5p cCACCTGAacaggac UCAGGUGU m7a Created HPSD3_10152_G13765.1_35752745
hsa-miR-1266-3p ccacctGAACAGGac CCCUGUUC m7b Created HPSD3_10152_G13765.1_35752745
hsa-miR-198 ccacCTGGACaggac GGUCCAGA m6b Disrupted HPSD3_10152_G13765.1_35752745
hsa-miR-26b-3p ccacctGAACAGGac CCUGUUCU m7a Created HPSD3_10152_G13765.1_35752745
hsa-miR-4421 ccacctgGACAGGac ACCUGUCU m6b Disrupted HPSD3_10152_G13765.1_35752745
hsa-miR-6748-3p ccacctGGACAGGAc UCCUGUCC m8a Disrupted HPSD3_10152_G13765.1_35752745

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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