SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080481
Gene Symbol: USP45

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.99435638T>C COSN2188485 RK041_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4463 gcctttCCAGTCTtc GAGACUGG m7b Created HPRT3_22768_G30398.1_99883524
hsa-miR-5681a gCCTTTCTagtcttc AGAAAGGG m7a Disrupted HPRT3_22768_G30398.1_99883524
hsa-miR-3978 gcCTTTCCAgtcttc GUGGAAAG m7b (m6b->m7b) HPRT3_22768_G30398.1_99883524
hsa-miR-6508-5p gccTTTCTAGtcttc UCUAGAAA m7b Disrupted HPRT3_22768_G30398.1_99883524
hsa-miR-6730-5p gCCTTTCTagtcttc AGAAAGGU m7a Disrupted HPRT3_22768_G30398.1_99883524
hsa-miR-8067 gccTTTCTAGtcttc CCUAGAAA m7b Disrupted HPRT3_22768_G30398.1_99883524
hsa-miR-875-3p gccTTTCCAGtcttc CCUGGAAA m7b Created HPRT3_22768_G30398.1_99883524

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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