SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080477
Gene Symbol: TENM3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.182793097A>T COSM3365565 TCGA-CZ-5455-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ar-3p aCAGTTTTcctcaat UAAAACUG m7b Created HPTA1_8499_G12201.1_183714244
hsa-miR-548a-3p aCAGTTTTcctcaat CAAAACUG m7b Created HPTA1_8499_G12201.1_183714244
hsa-miR-4500 acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-4496 acagtTTTCCTCaat GAGGAAAC m7a Created HPTA1_8499_G12201.1_183714244
hsa-miR-4458 acagttTACCTCaat AGAGGUAG m6b Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-3928-3p acagttTTCCTCaat GGAGGAAC m6b Created HPTA1_8499_G12201.1_183714244
hsa-miR-98-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-6858-5p acagtttTCCTCAat GUGAGGAG m6b Created HPTA1_8499_G12201.1_183714244
hsa-miR-3915 acagttTTCCTCAAt UUGAGGAA m8a Created HPTA1_8499_G12201.1_183714244
hsa-miR-548g-3p ACAGTTTTcctcaat AAAACUGU m8a Created HPTA1_8499_G12201.1_183714244
hsa-miR-548f-3p aCAGTTTTcctcaat AAAAACUG m7b Created HPTA1_8499_G12201.1_183714244
hsa-miR-548e-3p aCAGTTTTcctcaat AAAAACUG m7b Created HPTA1_8499_G12201.1_183714244
hsa-miR-548az-3p aCAGTTTTcctcaat AAAAACUG m7b Created HPTA1_8499_G12201.1_183714244
hsa-let-7a-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7b-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7c-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7d-5p acagttTACCTCaat AGAGGUAG m6b Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7e-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7f-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7g-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-let-7i-5p acagttTACCTCAat UGAGGUAG m7a Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-1224-5p acagtttTCCTCAat GUGAGGAC m6b Created HPTA1_8499_G12201.1_183714244
hsa-miR-202-3p acagttTACCTCaat AGAGGUAU m6b Disrupted HPTA1_8499_G12201.1_183714244

Mutation Mutation ID Sample Name Cancer Type
chr4:g.182793087CA>C COSM1053569 TCGA-D1-A160-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4633-3p acAGCTCCaaacagtt AGGAGCUA m6b Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-6500-5p acAGCTCCaaacagtt AGGAGCUA m6b Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-6740-5p acagctCCAAACagtt AGUUUGGG m6b Disrupted HPTA1_8499_G12201.1_183714244
hsa-miR-6874-5p acAGCTCCAaacagtt AUGGAGCU m7b (m7b->m6b) HPTA1_8499_G12201.1_183714244
hsa-miR-7850-5p acagcTCCAAACagtt GUUUGGAC m7a Disrupted HPTA1_8499_G12201.1_183714244

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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