SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080475
Gene Symbol: PLEKHM3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.208001369G>A COSM4624549 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p cttCCCTGCCAaaga UGGCAGGG m8a Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-1271-5p cttcccTGCCAAaga CUUGGCAC m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4736 cttcCCTGCCaaaga AGGCAGGU m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4763-3p cttCCCTGCCaaaga AGGCAGGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-7150 cttcCCTGCCAaaga CUGGCAGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-9-5p cttccctACCAAAGa UCUUUGGU m7b Created HPTK7_4639_G6807.1_208866105
hsa-miR-1207-5p cttCCCTGCCAaaga UGGCAGGG m8a Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-1271-5p cttcccTGCCAAaga CUUGGCAC m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4736 cttcCCTGCCaaaga AGGCAGGU m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4763-3p cttCCCTGCCaaaga AGGCAGGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-7150 cttcCCTGCCAaaga CUGGCAGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-9-5p cttccctACCAAAGa UCUUUGGU m7b Created HPTK7_4639_G6807.1_208866105

Mutation Mutation ID Sample Name Cancer Type
chr2:g.208001368C>T COSM1404888 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p ttCCCTGCCAaagaa UGGCAGGG m8a Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-1271-5p ttcccTGCCAAagaa CUUGGCAC m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4736 ttcCCTGCCaaagaa AGGCAGGU m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4763-3p ttCCCTGCCaaagaa AGGCAGGG m7b (m7b->m6b) HPTK7_4639_G6807.1_208866105
hsa-miR-514a-3p ttcccTGTCAAagaa AUUGACAC m6b Created HPTK7_4639_G6807.1_208866105
hsa-miR-514b-3p ttcccTGTCAAagaa AUUGACAC m6b Created HPTK7_4639_G6807.1_208866105
hsa-miR-7150 ttcCCTGCCAaagaa CUGGCAGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-9-5p ttccctgCCAAAGAa UCUUUGGU m7a Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-1207-5p ttCCCTGCCAaagaa UGGCAGGG m8a Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-1271-5p ttcccTGCCAAagaa CUUGGCAC m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4736 ttcCCTGCCaaagaa AGGCAGGU m6b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-4763-3p ttCCCTGCCaaagaa AGGCAGGG m7b (m7b->m6b) HPTK7_4639_G6807.1_208866105
hsa-miR-514a-3p ttcccTGTCAAagaa AUUGACAC m6b Created HPTK7_4639_G6807.1_208866105
hsa-miR-514b-3p ttcccTGTCAAagaa AUUGACAC m6b Created HPTK7_4639_G6807.1_208866105
hsa-miR-7150 ttcCCTGCCAaagaa CUGGCAGG m7b Disrupted HPTK7_4639_G6807.1_208866105
hsa-miR-9-5p ttccctgCCAAAGAa UCUUUGGU m7a Disrupted HPTK7_4639_G6807.1_208866105

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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