SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080475
Gene Symbol: PLEKHM3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.207828284C>A COSN8608488 J80_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-509-3p cACCAATCAacaatc UGAUUGGU m8a (m8a->m7a) HPRT3_15452_G20500.1_208693009
hsa-miR-653-5p caccaaTCAACAatc GUGUUGAA m6b Disrupted HPRT3_15452_G20500.1_208693009

Mutation Mutation ID Sample Name Cancer Type
chr2:g.207828273C>G COSN1232467 HCC134T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4656 aatccaTCAGCCCca UGGGCUGA m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4534 aaTCCATCagcccca GGAUGGAG m6b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4492 aatccatCAGCCCCa GGGGCUGG m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4437 aatccaTGAGCCCca UGGGCUCA m7b Created HPRT3_15452_G20500.1_208693009
hsa-miR-4283 aatccatGAGCCCCa UGGGGCUC m7b Created HPRT3_15452_G20500.1_208693009
hsa-miR-3134 aATCCATCAgcccca UGAUGGAU m8a (m8a->m7a) HPRT3_15452_G20500.1_208693009
hsa-miR-4675 aatccatCAGCCCCa GGGGCUGU m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-490-5p aATCCATGagcccca CCAUGGAU m7b Created HPRT3_15452_G20500.1_208693009
hsa-miR-6847-3p aatcCATGAGCCcca GGCUCAUG m8a Created HPRT3_15452_G20500.1_208693009
hsa-miR-762 aatccatCAGCCCCa GGGGCUGG m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-8075 aatcCATCAGCccca UGCUGAUG m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4656 aatccaTCAGCCCca UGGGCUGA m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4534 aaTCCATCagcccca GGAUGGAG m6b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4492 aatccatCAGCCCCa GGGGCUGG m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4437 aatccaTGAGCCCca UGGGCUCA m7b Created HPRT3_15452_G20500.1_208693009
hsa-miR-4675 aatccatCAGCCCCa GGGGCUGU m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-4283 aatccatGAGCCCCa UGGGGCUC m7b Created HPRT3_15452_G20500.1_208693009
hsa-miR-3134 aATCCATCAgcccca UGAUGGAU m8a (m8a->m7a) HPRT3_15452_G20500.1_208693009
hsa-miR-185-3p aatccatCAGCCCCa AGGGGCUG m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-185-3p aatccatCAGCCCCa AGGGGCUG m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-8075 aatcCATCAGCccca UGCUGAUG m7b Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-762 aatccatCAGCCCCa GGGGCUGG m7a Disrupted HPRT3_15452_G20500.1_208693009
hsa-miR-6847-3p aatcCATGAGCCcca GGCUCAUG m8a Created HPRT3_15452_G20500.1_208693009
hsa-miR-490-5p aATCCATGagcccca CCAUGGAU m7b Created HPRT3_15452_G20500.1_208693009

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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