SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080412
Gene Symbol: ZBTB38
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.141443035G>A COSM324357 585270 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-147a cctgtCCACACACtt GUGUGUGG m8a Created HPKMA_10219_G11843.1_141161887
hsa-miR-147b cctgtCCGCACACtt GUGUGCGG m8a Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-3138 ccTGTCCACAcactt UGUGGACA m8a Created HPKMA_10219_G11843.1_141161887
hsa-miR-3911 cctgTCCACACActt UGUGUGGA m8a Created HPKMA_10219_G11843.1_141161887
hsa-miR-4520-3p cCTGTCCAcacactt UUGGACAG m7b Created HPKMA_10219_G11843.1_141161887
hsa-miR-6867-5p cctgtcCACACACtt UGUGUGUG m7b Created HPKMA_10219_G11843.1_141161887
hsa-miR-6850-5p cctgTCCGCACactt GUGCGGAA m7a Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-6833-5p cctgTCCACACactt GUGUGGAA m7a Created HPKMA_10219_G11843.1_141161887
hsa-miR-648 cctgtccGCACACTt AAGUGUGC m7b Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-644a cctgtCCACACactt AGUGUGGC m6b Created HPKMA_10219_G11843.1_141161887
hsa-miR-4800-5p cctGTCCACacactt AGUGGACC m6b Created HPKMA_10219_G11843.1_141161887
hsa-miR-4754 cctGTCCGCAcactt AUGCGGAC m7b Disrupted HPKMA_10219_G11843.1_141161887

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141443027G>GC COSM1632860 RK167_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-760 aggCAGAGCCtgtcc CGGCUCUG m7b Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-4438 aggcagAGCCTGTcc CACAGGCU m7b Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-3194-3p agGCAGAGCctgtcc AGCUCUGC m7b (m7b->m6b) HPKMA_10219_G11843.1_141161887
hsa-miR-3155b aggcaGAGCCTGtcc CCAGGCUC m7b Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-3155a aggcaGAGCCTGtcc CCAGGCUC m7b Disrupted HPKMA_10219_G11843.1_141161887
hsa-miR-5088-5p aggcaGAGCCCTGtcc CAGGGCUC m8a Created HPKMA_10219_G11843.1_141161887
hsa-miR-484 aggcaGAGCCTGtcc UCAGGCUC m7b Disrupted HPKMA_10219_G11843.1_141161887

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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