SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080409
Gene Symbol: ZNF99

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758982A>G COSM128594 HN_62860 [upper_aerodigestive_tract][pharynx][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p ataCTGGGGAgaaac AUCCCCAG m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-3925-3p atACTGGAGagaaac ACUCCAGU m7b (m7b->m6b) HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-4713-5p atactgGGGAGAAac UUCUCCCA m7a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-4768-5p atactgGAGAGAAac AUUCUCUC m7b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-629-3p atactgGGGAGAAac GUUCUCCC m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6809-3p atactggAGAGAAac CUUCUCUU m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6833-3p atactgGAGAGAAAc UUUCUCUC m8a Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6845-3p atactGGAGAGaaac CCUCUCCU m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6873-3p atactgGAGAGAAac UUCUCUCU m7a Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-766-3p ataCTGGAGagaaac ACUCCAGC m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758979G>A COSM4562523 CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-5p ctgGAGAGAAaccct AUUCUCUC m7b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-515-5p cTGGAGAAaaaccct UUCUCCAA m7a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-519e-5p cTGGAGAAaaaccct UUCUCCAA m7a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-629-3p ctGGAGAAaaaccct GUUCUCCC m6b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6809-3p ctggAGAGAAaccct CUUCUCUU m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6833-3p ctgGAGAGAAAccct UUUCUCUC m8a Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6873-3p ctgGAGAGAAaccct UUCUCUCU m7a Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758974C>T COSM4395877 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p gagaaaCCCTACAaa AUGUAGGG m7b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-296-3p gagaAACCCTacaaa GAGGGUUG m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-3674 gagaaacTCTACAAa AUUGUAGA m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-4732-5p gagaaaCTCTACAaa UGUAGAGC m7a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6832-5p gagaaaCTCTACaaa AGUAGAGA m6b Created HHRBL_7495_BCBL1-2of3-SCL_15461

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758969CA>A COSM1271948 ESO-130 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p aaCCCTACAaatgcga AUGUAGGG m7b (m7b->m6b) HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-2909 aaCCCTAAaatgcga GUUAGGGC m6b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-3674 aaccCTACAAatgcga AUUGUAGA m6b Disrupted HHRBL_7495_BCBL1-2of3-SCL_15461

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758964C>T COSM2748558 8070199 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p acaAATGTGAAgaat UUCACAUU m8a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-23a-3p acaAATGTGAagaat AUCACAUU m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-23b-3p acaAATGTGAagaat AUCACAUU m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-23c acaAATGTGAagaat AUCACAUU m7b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-412-3p acaaatGTGAAGaat ACUUCACC m6b Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6754-3p acaaatGTGAAGAat UCUUCACC m7a Created HHRBL_7495_BCBL1-2of3-SCL_15461
hsa-miR-6837-3p acaaatGTGAAGaat CCUUCACU m6b Created HHRBL_7495_BCBL1-2of3-SCL_15461

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22758960G>T COSM994042 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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