SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077703
Gene Symbol: MIER1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.66976614G>T COSM3665166 SS6003305 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-5p tcagTTGTTGAatgt UCAACAAA m7a Created HPTA3_451_G706.1_67442312
hsa-miR-421 tcagtTGTTGAatgt AUCAACAG m6b Created HPTA3_451_G706.1_67442312
hsa-miR-4272 tcagttGTTGAATGt CAUUCAAC m8a Created HPTA3_451_G706.1_67442312
hsa-miR-7159-5p tcagTTGTTGAAtgt UUCAACAA m8a Created HPTA3_451_G706.1_67442312
hsa-miR-3065-5p tcagTTGTTGAatgt UCAACAAA m7a Created HPTA3_451_G706.1_67442312
hsa-miR-421 tcagtTGTTGAatgt AUCAACAG m6b Created HPTA3_451_G706.1_67442312
hsa-miR-4272 tcagttGTTGAATGt CAUUCAAC m8a Created HPTA3_451_G706.1_67442312
hsa-miR-7159-5p tcagTTGTTGAAtgt UUCAACAA m8a Created HPTA3_451_G706.1_67442312
hsa-miR-3065-5p tcagTTGTTGAatgt UCAACAAA m7a Created HPTA3_451_G706.1_67442312
hsa-miR-421 tcagtTGTTGAatgt AUCAACAG m6b Created HPTA3_451_G706.1_67442312
hsa-miR-4272 tcagttGTTGAATGt CAUUCAAC m8a Created HPTA3_451_G706.1_67442312
hsa-miR-7159-5p tcagTTGTTGAAtgt UUCAACAA m8a Created HPTA3_451_G706.1_67442312
hsa-miR-3065-5p tcagTTGTTGAatgt UCAACAAA m7a Created HPTA3_451_G706.1_67442312
hsa-miR-421 tcagtTGTTGAatgt AUCAACAG m6b Created HPTA3_451_G706.1_67442312
hsa-miR-4272 tcagttGTTGAATGt CAUUCAAC m8a Created HPTA3_451_G706.1_67442312
hsa-miR-7159-5p tcagTTGTTGAAtgt UUCAACAA m8a Created HPTA3_451_G706.1_67442312

Mutation Mutation ID Sample Name Cancer Type
chr1:g.66976613G>T COSM4702185 T256 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4719 gtcagTTTGTGAatg UCACAAAU m7a Created HPTA3_451_G706.1_67442312
hsa-miR-4719 gtcagTTTGTGAatg UCACAAAU m7a Created HPTA3_451_G706.1_67442312
hsa-miR-4719 gtcagTTTGTGAatg UCACAAAU m7a Created HPTA3_451_G706.1_67442312
hsa-miR-4719 gtcagTTTGTGAatg UCACAAAU m7a Created HPTA3_451_G706.1_67442312

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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