SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077498
Gene Symbol: FAM222B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.28758987C>T COSM4801318 CHC793T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6776-3p gtGTGGTTaatccca CAACCACC m6b Created HPTK7_3336_G4878.1_27085991
hsa-miR-6776-3p gtGTGGTTaatccca CAACCACC m6b Created HPTK7_3336_G4878.1_27085991

Mutation Mutation ID Sample Name Cancer Type
chr17:g.28758970C>T COSM4682953 T263 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-609 gagcACACCCacgcg AGGGUGUU m6b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-4764-5p gagCACATCCAcgcg UGGAUGUG m8a Created HPTK7_3336_G4878.1_27085991
hsa-miR-4455 gagCACACCCacgcg AGGGUGUG m7b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-3691-5p gagcaCATCCACgcg AGUGGAUG m7b Created HPTK7_3336_G4878.1_27085991
hsa-miR-6748-5p gagcaCACCCACgcg UGUGGGUG m7b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-6853-5p gagcacaCCCACGCg AGCGUGGG m7b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-609 gagcACACCCacgcg AGGGUGUU m6b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-4764-5p gagCACATCCAcgcg UGGAUGUG m8a Created HPTK7_3336_G4878.1_27085991
hsa-miR-4455 gagCACACCCacgcg AGGGUGUG m7b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-3691-5p gagcaCATCCACgcg AGUGGAUG m7b Created HPTK7_3336_G4878.1_27085991
hsa-miR-6853-5p gagcacaCCCACGCg AGCGUGGG m7b Disrupted HPTK7_3336_G4878.1_27085991
hsa-miR-6748-5p gagcaCACCCACgcg UGUGGGUG m7b Disrupted HPTK7_3336_G4878.1_27085991

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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