SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077498
Gene Symbol: FAM222B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.28759239CG>G COSM1381763 TCGA-F4-6570-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-328-5p GCCCCCCCgaatgtga GGGGGGGC m8a Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4787-5p gccCCCCCGaatgtga GCGGGGGU m6b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-6727-5p gcccCCCCGAatgtga CUCGGGGC m6b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-328-5p GCCCCCCCgaatgtga GGGGGGGC m8a Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4787-5p gccCCCCCGaatgtga GCGGGGGU m6b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-6727-5p gcccCCCCGAatgtga CUCGGGGC m6b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676

Mutation Mutation ID Sample Name Cancer Type
chr17:g.28759225C>T COSM977024 TCGA-FI-A2D2-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7b-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7c-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7d-5p accgtgtCTACCTCa AGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7e-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7f-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7g-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7i-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30a-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30b-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30c-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30d-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30e-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-3529-5p accgtGTCTACCTca AGGUAGAC m8a Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-379-5p accgtGTCTACCtca UGGUAGAC m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-3927-3p accgtgTCTACCTca CAGGUAGA m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4458 accgtgtCTACCTCa AGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4462 aCCGTGTCtacctca UGACACGG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4500 accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-6831-5p accgtgTCTACCTca UAGGUAGA m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-98-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7a-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7b-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7c-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7d-5p accgtgtCTACCTCa AGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7e-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7f-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7g-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-let-7i-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30a-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30b-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30c-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30d-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-30e-5p accgTGTTTACctca UGUAAACA m7b Created HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-3529-5p accgtGTCTACCTca AGGUAGAC m8a Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-379-5p accgtGTCTACCtca UGGUAGAC m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-3927-3p accgtgTCTACCTca CAGGUAGA m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4458 accgtgtCTACCTCa AGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4462 aCCGTGTCtacctca UGACACGG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-4500 accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-6831-5p accgtgTCTACCTca UAGGUAGA m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676
hsa-miR-98-5p accgtgtCTACCTCa UGAGGUAG m7b Disrupted HHHNH_1216_FAM222B|NM_001077498|exon_CDS|-5.43048973857074|0.0104555998596676

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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