SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077397
Gene Symbol: IRF2BP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607351A>G COSM1662301 ccRCC-15 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4506 gacACCCATTTtgtg AAAUGGGU m8a Disrupted HPTA3_2333_G3415.1_234743085
hsa-miR-4698 gacaccCATTTTGtg UCAAAAUG m7b Disrupted HPTA3_2333_G3415.1_234743085

Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607350T>A COSM334261 LUAD-B01811 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4506 acACCCATTTtgtgc AAAUGGGU m8a Disrupted HPTA3_2333_G3415.1_234743085
hsa-miR-4698 acaccCATTTTGtgc UCAAAAUG m7b Disrupted HPTA3_2333_G3415.1_234743085
hsa-miR-4719 acacccaATTTGTGc UCACAAAU m7b Created HPTA3_2333_G3415.1_234743085
Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607341G>T COSM905778 TCGA-B5-A11V-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607331G>A COSM1668576 786-0 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4475 cccgtccGTCCCTTc CAAGGGAC m7b Disrupted HPTA3_2333_G3415.1_234743085
hsa-miR-4804-5p cCCGTCCAtcccttc UUGGACGG m7b Created HPTA3_2333_G3415.1_234743085
hsa-miR-6757-5p cccgtcCATCCCTtc UAGGGAUG m7b Created HPTA3_2333_G3415.1_234743085
hsa-miR-92b-5p cccgtCCGTCCCTtc AGGGACGG m8a Disrupted HPTA3_2333_G3415.1_234743085

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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