SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001077397
Gene Symbol:	IRF2BP2

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr1:g.234607418G>A		COSM905779	TCGA-B5-A11E-01	[endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6746-5p	cCTCCCGGactcctc	CCGGGAGA	m7a	Disrupted	HHHNE_8857_IRF2BP2|NM_001077397|exon_CDS|-5.68064586789993|0.285608400612033
hsa-miR-1289	cctcccGGACTCCtc	UGGAGUCC	m7b	Disrupted	HHHNE_8857_IRF2BP2|NM_001077397|exon_CDS|-5.68064586789993|0.285608400612033
hsa-miR-425-3p	ccTCCCGAactcctc	AUCGGGAA	m6b	Created	HHHNE_8857_IRF2BP2|NM_001077397|exon_CDS|-5.68064586789993|0.285608400612033
hsa-miR-4497	ccTCCCGGActcctc	CUCCGGGA	m7b	(m7b->m6b)	HHHNE_8857_IRF2BP2|NM_001077397|exon_CDS|-5.68064586789993|0.285608400612033

Mutation		Mutation ID	Sample Name	Cancer Type
chr1:g.234607389G>T		COSM340557	LUAD-F00365	[lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-545-3p	ccccgcTTTGCTGca	UCAGCAAA	m7b	Created	HHHNE_8857_IRF2BP2|NM_001077397|exon_CDS|-5.68064586789993|0.285608400612033

Mutation		Mutation ID	Sample Name	Cancer Type
chr1:g.234607373C>T		COSM376531	LUAD-NYU847	[lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr1:g.234607158G>A		COSM4693015	T407	[large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-5096	tgaaaGTGAAAaaag	GUUUCACC	m6b	Disrupted	HHHNE_8856_IRF2BP2|NM_001077397|exon_utr3|-5.97479460274455|0.382012710588466
hsa-miR-335-3p	tgaaagTGAAAAAag	UUUUUCAU	m7a	Disrupted	HHHNE_8856_IRF2BP2|NM_001077397|exon_utr3|-5.97479460274455|0.382012710588466
hsa-miR-2681-5p	tgaaaGTAAAAaaag	GUUUUACC	m6b	Created	HHHNE_8856_IRF2BP2|NM_001077397|exon_utr3|-5.97479460274455|0.382012710588466

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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