SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077349
Gene Symbol: ZNF682

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006254AG>G COSM4951137 CHC793T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4684-5p gaacaTAGAGAattc CUCUCUAC m6b Created HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-5571-5p gaacataGAGAATTc CAAUUCUC m7b Created HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6809-3p gaacatAAGAGAAttc CUUCUCUU m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006252G>T COSM993472 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5571-5p cataaGAGAATTcat CAAUUCUC m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-183-3p cataagaTAATTCAt GUGAAUUA m7b Created HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-4452 cataagaGAATTCAt UUGAAUUC m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6809-3p catAAGAGAAttcat CUUCUCUU m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006240G>T COSM1611879 BN42T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6833-3p catactgGAGAGAAa UUUCUCUC m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6845-3p catactGGAGAGaaa CCUCUCCU m6b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6873-3p catactgGAGAGAAa UUCUCUCU m7a Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-766-3p cataCTGGAGagaaa ACUCCAGC m6b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-139-5p catACTGTAGAgaaa UCUACAGU m8a Created HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-144-3p cATACTGTAgagaaa UACAGUAU m8a (m7a->m8a) HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-16-1-3p cATACTGGagagaaa CCAGUAUU m7a Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-3925-3p catACTGGAGagaaa ACUCCAGU m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-4768-5p catactgGAGAGAAa AUUCUCUC m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-4684-5p catactGTAGAGAaa CUCUCUAC m7b Created HHRBL_7460_BCBL1-2of3-SCL_14449

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006236G>T COSM3531190 TCGA-EE-A20C-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-5p ctgGAGAGAAaccct AUUCUCUC m7b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-629-5p ctggagaTAAACCCt UGGGUUUA m7b Created HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6809-3p ctggAGAGAAaccct CUUCUCUU m6b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6833-3p ctgGAGAGAAAccct UUUCUCUC m8a Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6845-3p ctGGAGAGaaaccct CCUCUCCU m6b Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449
hsa-miR-6873-3p ctgGAGAGAAaccct UUCUCUCU m7a Disrupted HHRBL_7460_BCBL1-2of3-SCL_14449

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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