SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001076781
Gene Symbol: ZNF391

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.27400465C>A COSM1442731 TCGA-D5-6929-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 tGTCCTGCAcagaag UGCAGGAC m8a (m8a->m7a) HPRT3_21462_G28664.1_27368239
hsa-miR-143-5p tgtcCTGCACagaag GGUGCAGU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-26b-3p tgtcctGAACAGaag CCUGUUCU m6b Created HPRT3_21462_G28664.1_27368239
hsa-miR-4652-3p tgtcctgAACAGAAg GUUCUGUU m7b Created HPRT3_21462_G28664.1_27368239
hsa-miR-4722-5p tgTCCTGCacagaag GGCAGGAG m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5008-3p tgtcctGCACAGaag CCUGUGCU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-6737-3p tgtcctGCACAGAag UCUGUGCU m7a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-6889-3p tgtcctGCACAGAag UCUGUGCC m7a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-7157-3p tgtcctGCACAGAag UCUGUGCU m7a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-1286 tGTCCTGCAcagaag UGCAGGAC m8a (m8a->m7a) HPRT3_21462_G28664.1_27368239
hsa-miR-143-5p tgtcCTGCACagaag GGUGCAGU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-26b-3p tgtcctGAACAGaag CCUGUUCU m6b Created HPRT3_21462_G28664.1_27368239
hsa-miR-4652-3p tgtcctgAACAGAAg GUUCUGUU m7b Created HPRT3_21462_G28664.1_27368239
hsa-miR-4722-5p tgTCCTGCacagaag GGCAGGAG m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5008-3p tgtcctGCACAGaag CCUGUGCU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-6737-3p tgtcctGCACAGAag UCUGUGCU m7a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-6889-3p tgtcctGCACAGAag UCUGUGCC m7a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-7157-3p tgtcctGCACAGAag UCUGUGCU m7a Disrupted HPRT3_21462_G28664.1_27368239

Mutation Mutation ID Sample Name Cancer Type
chr6:g.27400462C>A COSM1076917 TCGA-A5-A0GH-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 aaatGTCCTGCAcag UGCAGGAC m8a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-143-5p aaatgtcCTGCACag GGUGCAGU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-4436a aaaTGTCCTGCacag GCAGGACA m8a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-4722-5p aaatgTCCTGCacag GGCAGGAG m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5000-3p aaaTGTCCTGcacag UCAGGACA m7b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5011-3p aaatgtCATGCACag GUGCAUGG m7a Created HPRT3_21462_G28664.1_27368239
hsa-miR-6076 aaatGTCATGCacag AGCAUGAC m7b Created HPRT3_21462_G28664.1_27368239
hsa-miR-6797-3p aaatGTCATGCAcag UGCAUGAC m8a Created HPRT3_21462_G28664.1_27368239
hsa-miR-1286 aaatGTCCTGCAcag UGCAGGAC m8a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-143-5p aaatgtcCTGCACag GGUGCAGU m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-4436a aaaTGTCCTGCacag GCAGGACA m8a Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-4722-5p aaatgTCCTGCacag GGCAGGAG m6b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5000-3p aaaTGTCCTGcacag UCAGGACA m7b Disrupted HPRT3_21462_G28664.1_27368239
hsa-miR-5011-3p aaatgtCATGCACag GUGCAUGG m7a Created HPRT3_21462_G28664.1_27368239
hsa-miR-6076 aaatGTCATGCacag AGCAUGAC m7b Created HPRT3_21462_G28664.1_27368239
hsa-miR-6797-3p aaatGTCATGCAcag UGCAUGAC m8a Created HPRT3_21462_G28664.1_27368239

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser