SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001048199
Gene Symbol: RCC1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.28511332T>G COSN6033126 RK190_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520f-3p agcatgAGCACTTat AAGUGCUU m7a Created HPHES_99_G128.1_28837859
hsa-miR-512-3p agcatgAGCACTTat AAGUGCUG m7a Created HPHES_99_G128.1_28837859
hsa-miR-519a-3p agcatgaGCACTTat AAAGUGCA m6b Created HPHES_99_G128.1_28837859
hsa-miR-519b-3p agcatgaGCACTTat AAAGUGCA m6b Created HPHES_99_G128.1_28837859
hsa-miR-519c-3p agcatgaGCACTTat AAAGUGCA m6b Created HPHES_99_G128.1_28837859
hsa-miR-520a-3p agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-520b agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-520c-3p agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-520d-3p agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-520e agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-6847-3p agCATGAGCacttat GGCUCAUG m7b (m6b->m7b) HPHES_99_G128.1_28837859
hsa-miR-8079 agcatGATCACTtat CAGUGAUC m7b Disrupted HPHES_99_G128.1_28837859
hsa-miR-302e agcatgAGCACTTAt UAAGUGCU m8a Created HPHES_99_G128.1_28837859
hsa-miR-1245a agcatGATCACTTat AAGUGAUC m8a Disrupted HPHES_99_G128.1_28837859
hsa-miR-302a-3p agcatgAGCACTTAt UAAGUGCU m8a Created HPHES_99_G128.1_28837859
hsa-miR-302b-3p agcatgAGCACTTAt UAAGUGCU m8a Created HPHES_99_G128.1_28837859
hsa-miR-302c-3p agcatgAGCACTTAt UAAGUGCU m8a Created HPHES_99_G128.1_28837859
hsa-miR-302d-3p agcatgAGCACTTAt UAAGUGCU m8a Created HPHES_99_G128.1_28837859
hsa-miR-372-3p agcatgAGCACTTat AAAGUGCU m7b Created HPHES_99_G128.1_28837859
hsa-miR-373-3p agcatgAGCACTTat GAAGUGCU m7b Created HPHES_99_G128.1_28837859

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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